Obtain the permuted importance variable measure
Source:R/permute_importance.R
permute_importance.Rd
Obtain the permuted importance variable measure
Value
A data frame with permuted importance measures, imp is the permuted importance measure defined in Brieman paper, imp2 is the permuted importance measure defined in randomForest package, the standard deviation (sd.im and sd.imp2) for each measure is computed and the also the standardized mesure.
Examples
pprf.crab <- PPforest(data = crab, class = 'Type',
std = TRUE, size.tr = 1, m = 100, size.p = .4, PPmethod = 'LDA', parallel = TRUE, core = 2)
permute_importance(ppf = pprf.crab)
#> nm imp sd.imp imp2 sd.imp2 imp2.std imp.std
#> 1 CW 12.27 11.128138 0.1669751 0.1501726 1.111888 1.102610
#> 2 CL 14.00 9.982814 0.1936907 0.1380000 1.403555 1.402410
#> 3 BD 14.82 13.674706 0.2036439 0.1870608 1.088651 1.083753
#> 4 RW 15.41 11.684484 0.2120529 0.1599439 1.325796 1.318843
#> 5 FL 16.24 12.917860 0.2248441 0.1807173 1.244175 1.257174